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Direct rivals · Direct rivals in the full size suv segment

2006 Honda Pilot vs 2006 Toyota Highlander

Reliability comparison based on NHTSA recall and complaint records.

Synced 2026-05-03 Source: NHTSA public records Reviewed by ASE-certified contributors
Quick verdict
2006 Honda Pilot edges ahead by a narrow margin

These two are direct rivals built for the same use case. The 2006 Honda Pilot comes out slightly ahead on reliability data (3.7 versus 3.5), but the margin is small enough that specific feature preferences could legitimately tip the choice the other way.

More reliable

2006 Honda Pilot

3.7/5
Reliability score
266 complaints
0 recalls (0 critical)
$14,650 repair exposure
vs

2006 Toyota Highlander

3.5/5
Reliability score
273 complaints
2 recalls (0 critical)
$13,650 repair exposure

Stories from the shop

The 2006 Honda Pilot edges this one, but it's tight. We're talking 3.7 versus 3.5 on reliability. Close enough that specific feature preferences or one favorable price could legitimately swing it the other way.

If you lean 2006 Honda Pilot, know what you're getting into on airbags and body. Those categories have noticeably more complaints than the 2006 Toyota Highlander sees, and they're not cheap items when they go.

Going with the 2006 Toyota Highlander? Watch the brakes and engine. The 2006 Honda Pilot has fewer reports in those categories, so you'd be trading one set of weak spots for another.

Bottom line: pick based on use case more than the spec sheet. If you tow heavy and don't want to think about it, that's one calculation. If you're a daily driver and want the cheapest path forward, that's another. Both of these will get you down the road. We're just telling you where each one is most likely to break.

— ProblemsByVin editorial team, drawing on the NHTSA data and shop experience.

Side-by-side by problem area

Category
2006 Honda Pilot
2006 Toyota Highlander
brakes
19 reports
severe · ~$450
78 reports
severe · ~$450
airbags
60 reports
critical · ~$1,100
11 reports
severe · ~$1,100
engine
27 reports
moderate · ~$3,100
33 reports
severe · ~$3,100
cruise control
15 reports
severe · ~$600
35 reports
critical · ~$600
electrical
16 reports
severe · ~$850
21 reports
moderate · ~$850
visibility
No reports
21 reports
moderate · ~$350
body
19 reports
severe · ~$1,500
No reports
powertrain
No reports
19 reports
severe · ~$2,500
suspension
18 reports
moderate · ~$900
No reports
steering
No reports
15 reports
severe · ~$700

Common questions

Which is more reliable, the 2006 Honda Pilot or the 2006 Toyota Highlander?

Based on the NHTSA data we track, the 2006 Honda Pilot comes out ahead with a reliability score of 3.7 versus 3.5. The margin is narrow, so the verdict could shift if you weight specific categories differently or factor in your own use case.

What goes wrong more often on the 2006 Honda Pilot?

Compared to the 2006 Toyota Highlander, the 2006 Honda Pilot sees more reported issues in airbags and body. That doesn't mean it's a bad truck — it means those are the categories worth budgeting for if you go that direction.

What goes wrong more often on the 2006 Toyota Highlander?

Compared to the 2006 Honda Pilot, the 2006 Toyota Highlander has more complaints in brakes and engine. Whether that's a deal-breaker depends on the cost and severity — see the comparison table above for repair cost ranges.

Which has more recalls?

The 2006 Toyota Highlander has more active recalls (2 vs 0). Total count is less important than severity, though — a vehicle with one critical recall and zero moderate ones is generally riskier than one with five moderate recalls.

Is an extended warranty worth it on either of these?

Both vehicles are out of factory bumper-to-bumper coverage at this point. Combined repair exposure across the top problem categories runs around $14,650 on the higher-risk vehicle. A quality service contract typically costs $1,800–3,500 over 3 years, so a single major failure usually pays for the contract. The math favors warranty coverage on whichever vehicle you choose, especially if you plan to keep it past 100,000 miles.

Related comparisons

Reliability scores, complaint counts, and severity ratings derived from the NHTSA public records database. "Repair exposure" is the sum of average independent-shop repair costs across each vehicle's tracked problem categories and is intended as a relative comparison, not an exact prediction. Editorial commentary written by ProblemsByVin contributors and reviewed by ASE-certified mechanics. Some links on this page are affiliate links.
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